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MSc Advanced Neuroimaging - Autumn Term 2014

NB for current timetable information, including timings and venues, please see the course Google calendar

Please note - only students enrolled for their course in 2014 can have access to these resources.

To enable seamless redirection when accessing handouts via these timetable links, it is advisable to have a new tab already logged in to Moodle.

WEEK 1 WEEK 2 WEEK 3 WEEK 4 WEEK 5 WEEK 6 WEEK 7 WEEK 8 WEEK 9 WEEK 10 WEEK 11

Week of 29th September 2014

Title
Lecturer
Handout
(P1MO01) Module Overview - Neuroimaging, Physics, Maths & Computers John Thornton  
(P1CM01) Vectors John Thornton Handout
References
(P1CIT01) Electronic Representation of Data Mark White
Handout
References
Worksheet
(LPRT01) Science & The Media Adam Liston
Handout
References
(P1CP01) Properties of Waves
Chris Sinclair Handout
References
(P1CP02) Atoms & Light Chris Sinclair Handout
(C1N01 & C1N02) The Cortex & Basal Ganglia Tarek Yousry
Handout

Week of 6th October 2014

Title
Lecturer
Handout
(P1CM02) Exponential Changes John Thornton
Handout
Problems
Answers
(P1CM03) Periodic Functions & Phase Adam Liston
Handout
(P1CIT02) Processing and Compressing Images Mark White
Handout
Worksheet
References
(LPRTL1) Library Skills: Search Skills Kate Brunskill
 
(C1PF01) Vestibular System Ros Davies
Handout
(C1PF03) Auditory System Maria Chait
Handout
References

Week of 13th October 2014

Title Lecturer Handout
(P1CIT03 - P1CIT04) Image Structure and Metadata Mark White
Handout
References
(P1MLW1) Workshop: Matlab 1 - Phase & Vectors Adam Liston / Vladimir Litvak Handout
Data
(LPRT02) Critical Appraisal I Adam Liston
Handout
(P1CM04) Complex Numbers Adam Liston
Handout
Problems
References
(C1NW3) Workshop: Spine Sachit Shah  
(C1PF04) Visual System Gordon Plant
Handout
(C1N04) Skull Base & Spine Prem Rangi
Handout
References
(C1PF05) Circulation Martin Brown
Handout
References

Week of 20th October 2014

Title
Lecturer
Handout
(P1MLW2) Workshop: Matlab 2 - Matrices & Complex Numbers Vladimir Litvak / Adam Liston Handout
(P1CP04) Diagnostic X-rays, CT and X-ray Angiography Konstantin Lozhkin Handout
References
(LPRT03) Critical Appraisal II Adam Liston
 
(LPRT04) Critical Appraisal III Adam Liston Essay Mark Sheet
(P1CM07) The Fourier Transform & 1-D Signals Adam Liston Handout
References
(C1PF02) Somatosensory System Alexander Kraskov Handout
References
(C1CO01) Clinical Presentation & Treatment of Epilepsy Sofia Eriksson Handout
References
(LPRTL2) Library Skills: Endnote Kate Brunskill
 

Week of 27th October 2014

Title
Lecturer Handout
(C1PNMD03) Imaging of Peripheral Nervous System Sachit Shah Handout
(C1CO05) Spinal Tumours - Classification, Management & Surgery David Choi
Handout
(C1PNMD01) Neuromuscular Disorders - Clinical Overview: Peripheral Neuropathy Jasper Morrow
Handout
References
(C1PNMD02) Neuromuscular Disorders - Clinical Overview: Myopathy Jasper Morrow Handout
References
(C1CO03) Clinical Presentation of Dementia Jason Warren
Handout
References
(C1CO04) WHO Classification of Brain Tumours Sebastian Brandner
 

Week of 3rd November 2014

Title Lecturer
Handout
(LPRT05) Essay Writing I: Structure, Style & Plagiarism Adam Liston
 
(P1CM05) How Matrices Can Represent Images John Thornton
Handout
Questions
(P1CIT05) Operating Systems and Security Mark White
Handout
References
(P1PIF01) Medical Image Restoration & Analogue to Digital Conversion Roman Rodionov Handout
References
(P1PIF02) PSF, MTF, Methods of Image Reconstruction Roman Rodionov See P1PIF01
(C1PNMD05) Imaging of Plexus Chandra Hoskote Handout
(C1FI01) Fetal Imaging Ash Ederies  
(C1FI02) Neonatal Hypoxia-ischaemia Nikki Robertson
(C1G01) Preclinical Imaging Ian Harrison
Handout
References
(C1CO02) Epidemiology of Epilepsy Aidan Nelligan
 
(C1NW5) Workshop: Neuroanatomy Orientation Peer led
Workshop Instructions
(P1CP03) The Nucleus & Radiation Chris Sinclair
Handout
(P1CM08) The Fourier Transform Applied to Imaging  John Thornton
Handout

 Week of 10th November 2014

Title Lecturer Handout
(C1NW2) Lecture & Workshop: Identifying Vasculature Adam Rennie
 
(C1PNMD04) Imaging of Muscles Chris Sinclair
Handout
References
(C2S02) Clinical Presentation of Stroke David Werring
Handout
(C2S01) Small Vessel Disease David Werring Handout
(C2S03) T2*-based imaging: detecting cerebral bleeding & other neuroimaging applications David Werring Handout
References
(P1CM06) Problems class John Thornton / Adam Liston  
(P1PIF03) Image Quality, Strategies of Image Quality Correction Roman Rodionov See P1PIF01
(LPRT06) Presentation Skills & Chairing Discussions Adam Liston
 
(P1CIT06) Operating Systems and Security Mark White
 
(P1MLW3) Workshop: Matlab 3 - Fourier Transforms in 1D & 2D Adam Liston / Vladimir Litvak Handout
Data
Matlab Scripts

Week of 17th November 2014

Title Lecturer
Handout
(P1CIT07) Core IT - Q&A 2 Mark White
 
(P2MRI01) Why MRI is so Popular: the MRI Scanner & MR Applications Torben Schneider Handout
(P2MRI02) The Origin of the Signal: Bulk Magnetization and the Rotating Frame Nick Todd
Handout
References
(C2S05) Treatment of Haemorrhagic Stroke Thomas Solbach  
(C2S07) CT / Perfusion- and Diffusion-Weighted MR Imaging in Stroke Rolf Jager
Handout
(C1N03) Cranial Nerves Indran Davagnanam Handout
(C2S10) Motor Recovery - fMRI in Rehabilitation Nick Ward
Handout
(C2S08) MRI of Haemorrhage & Stroke Matthew Adams
Handout
(C2S09) CT Angiography & MR Angiography Matthew Adams Handout
(C2S04) Treatment of Ischaemic Stroke Richard Perry
Handout

 Week of 24th November 2014

Title Lecturer
Handout
(LPRT07) Essay Writing II: Self-Assessment & Careers I: Skills Audit Adam Liston
Handout
Key Skills Audit
(P2MRI03) The Origin of the Signal: Excitation, Relaxation, Free Induction Decay & Echo Formation Nick Todd
Handout
References
(P2MRI04) The Origin of the Image Contrast: Bloch Equations, T1, T2, PD and T2* Martina Callaghan Handout
(LPRT09) Assertive Communication Adam Liston
Handout
(C2S11) Ultrasound Doppler Dean Barratt Handout
References
(C2S13) Carotid Imaging Martin Graves
Handout
(C2II02) Central Nervous System Lupus David Isenberg
Handout
(C1N05) Embryology & Anatomy of the Orbit Katherine Miszkiel Handout
References
(P1SW1) Workshop: Statistics 1 (Group 1)    

Week of 1st December 2014

Title Lecturer Handout
(P2MRIW1) Workshop: Hands-on MRI contrast Claudia Wheeler-Kingshot Handout
(P2MRI05) Image Formation: k-space, Spatial Encoding & The Fourier Transform  Rebecca Samson Handout
References
Workshop: Stroke MRI Matthew Adams
 
(P1SW2) Workshop: Statistics 2 (Group 1)    
(C2II04) Neuro-imaging of HIV-related disease Rolf Jager
Handout
(C2II05) Viral Chandra Hoskote Handout (1st half)
(C2II06) Bacterial Chandra Hoskote Handout (2nd half)
(P1SW3) Workshop: Statistics 3 (Group 1)    

Week of 8th December 2014

Title Lecturer Handout
(P2MRI06) Image Formation: Basic Pulse Sequences (Gradient Echo & Spin Echo) Rebecca Samson
Handout
References
(P2MRI08) MR Contrast Agents: Theory, Applications & Safety John Thornton
Handout
(P2MRI09) Advanced Pulse Sequences: Fast Imaging (FSE, EPI & FLASH) Rebecca Samson Handout
References
(P2MRI10) MR Equipment and Safety Enrico de Vita
Handout
(P2MRI11) MR Angiography John Thornton
Handout
(C1NW1) Workshop: Identifying Anatomic Structures - Cortex, Deep Nuclei Tarek Yousry
 
(P2MRIW2) Workshop: MR Data Acquisition N Weiskopf Handout
RP STUDY DESIGN PRESENTATIONS (PTy2) Adam Liston
 
(C2S12) Stroke Territories Prem Rangi
Handout
(C2SW3) Workshop: Differential Diagnosis of Haemorrhage & Stroke  Prem Rangi