2008/09 Intake

Tom Blacker

  • Flügge, Anton J., Sofia C. Olhede, and David J. Murrell. 2012. The memory of spatial patterns: changes in local abundance and aggregation in a tropical forest. Ecology 93:1540-1549. http://dx.doi.org/10.1890/11-1004.

Jack Honeysett

  • Nicolaou, N., Marsh, R. J., Blacker, T., Armoogum, D. A., Bain, A. J.; Time-resolved fluorescence and FCS studies of dye-doped DNA, Nanophotonic Materials VI, SPIE 7393, 2009.

Anton Flügge

  • Honeysett J. E., Stride E. & Leung T. Feasibility study of non-invasive oxygenation measurement in a deep blood vessel using acousto-optics and microbubbles. Advances in Experimental Medicine and Biology (in press). 
  • Honeysett J., Stride E. & Leung T. Monte Carlo simulations of acousto-optics with microbubbles. Proceedings of SPIE 7564, 75640K(2010)
  • Leung TS, Honeysett JE, Stride E, Deng J. (2013) Light propagation in a turbid medium with insonified microbubbles. J Biomed Opt. 2013 Jan;18(1):15002

Caroline Hartley

  • C. Hartley, L. Berthouze, S.R.Mathieson, G.B.Boylan, J.M.Rennie, N. Marlow and S.F.Farmer. (2012) Long-range temporal correlations in the EEG bursts of human preterm babies. (2012) PLoS One. 7(2): e31543.
  • T.J.Taylor, C. Hartley, P.L. Simon, I.Z. Kiss and L. Berthouze . (2013) Identification of criticality in neuronal avalanches: I. A theoretical investigation of the non-driven case. The Journal of Mathematical Neuroscience 2013
  • C. Hartley, T.J. Taylor, I.Z. Kiss, S.F. Farmer and L. Berthouze. (2013) Identification of criticality in neuronal avalanches: II. A theoretical and empirical investigation of the driven case. The Journal of Mathematical Neuroscience 2013
  • C. Hartley, S.F. Farmer and L. Berthouze (2013) Long-range temporal correlations leads to small-world connectivity in an activity-dependent neuronal network. The Journal of Mathematical Neuroscience 2013

Joanna Lewis

  • Lewis J, Walker AS, Castro H, De Rossi A, Gibb DM, Giaquinto C, Klein N, Callard R. (2012) Age and CD4 count at initiation of antiretroviral therapy in HIV-infected children: effects on long-term T-cell reconstitution. J Infect Dis. 2012 Feb 15;205(4):548-56.
  • Lewis J, Walker AS, Klein N, Callard R.  (2012) CD31+ cell percentage correlation with speed of CD4+ T-cell count recovery in HIV-infected adults is reversed in children: higher thymic output may be responsible. Clin Infect Dis. 2012 Jul;55(2):304-7; author reply 307.

Tracy Moroz


  • Kolyva C, Tachtsidis I, Ghosh A, Moroz T, Cooper CE, Smith M, Elwell CE. (2012) Systematic investigation of changes in oxidized cerebral cytochrome c oxidase concentration during frontal lobe activation in healthy adults.
  • Biomed Opt Express. 2012 Oct 1;3(10):2550-66. doi: 10.1364/BOE.3.002550. Epub 2012 Sep 14. Rong Z, Banaji M, Moroz T, Cooper CE. (2013) Can mitochondrial cytochrome oxidase mediate hypoxic vasodilation via nitric oxide metabolism? Adv Exp Med Biol. 2013;765:231-8.
  • Moroz T, Banaji M, Robertson NJ, Cooper CE, Tachtsidis I. (2012) Computational modelling of the piglet brain to simulate near-infrared spectroscopy and magnetic resonance spectroscopy data collected during oxygen deprivation. J R Soc Interface. 2012 Jul 7;9(72):1499-509.
  • Tracy Moroz, Murad Banaji, Martin Tisdall, Chirs E. Cooper, Clare E. Elwell, and Ilias Tachtsidis. Development of a model to aid NIRS data interpretation: Results from a hypercapnia study in healthy adults. Advances in Experimental Medicine and Biology series. (accepted for publication January 2011)

Martin O'Reily

  • O'Reilly, M.; Roth, A.; Häusser, M. & Griffin, L.D. (2011). A circle-based method for detection of neural fibre cross-sections in classically stained 2D electron micrographs. Sixth international workshop on Microscopic Image Analysis with Applications in Biology (MIAAB), Heidelberg (accepted for oral presentation).

Mae Woods

  • Carmona-Fontaine C, Theveneau E, Tzekou A, Tada M, Woods M, Page KM, Parsons M, Lambris JD, Mayor R. (2011) Complement fragment C3a controls mutual cell attraction during collective cell migration. Dev Cell. 2011 Dec 13;21(6):1026-37. 

Fran Norris

  • Cleary JO, Wiseman FK, Norris FC, Price AN, Choy M, Tybulewicz VL, Ordidge RJ, Brandner S, Fisher EM, Lythgoe MF. Structural correlates of active-staining following magnetic resonance microscopy in the mouse brain. 2011 Jun 1;56(3):974-83. Epub 2011 Feb 16.
  • Cleary JO, Modat M, Norris FC, Price AN, Jayakody SA, Martinez-Barbera JP, Greene ND, Hawkes DJ, Ordidge RJ, Scambler PJ, Ourselin S, Lythgoe MF. Magnetic resonance virtual histology for embryos: 3D atlases for automated high-throughput phenotyping. 2011 Jan 15;54(2):769-78. Epub 2010 Jul 23.