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| Fragment 6 |
The PDB codes are hyperlinked to a schematic LIGPLOT diagram in PDBsum.
| Table S3.6. Fragment 6 interactions with Arg |
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Listed below are the
ligands in the PDB that contain the chemical fragment shown on the
left and which interact via this fragment with the side chain of a
Arg residue via hydrogen bonds.
The PDB codes are hyperlinked to a schematic LIGPLOT diagram in PDBsum. |
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| Ligand | |
Description | ||||||||||||||||||||||
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1. Ligand: DCS D-[3-hydroxy-2-methyl-5-phosphonooxymethyl-pyridin-4-ylmethyl]-n,o-cycloserylamide PDB code: 1vfs. |
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2. Ligand: IN5 {1-[(3-hydroxy-methyl-5-phosphonooxy-methyl-pyridin-4-ylmethyl)-amino]-ethyl}-phosphonic acid PDB codes: 1bd0, 2vd9. |
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3. Ligand: PLP Pyridoxal-5'-phosphate PDB codes: 1b54, 1ct5, 1rcq, 1sft, 1vfh, 1w8g, 1xfc, 1xql, 2dy3, 2sfp, 3co8. |
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4. Ligand: PMP 4'-deoxy-4'-aminopyridoxal-5'-phosphate PDB code: 1xql. |
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5. Ligand: MK1 N-[2(r)-hydroxy-1(s)-indanyl]-5-[(2(s)-tertiary butylaminocarbonyl)-4(3-pyridylmethyl)piperazino]- 4(s)-hydroxy-2(r)-phenylmethylpentanamide PDB codes: 1hsh, 1sdu, 1sgu, 2avo, 2avs, 2avv. |
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6. Ligand: PDD N-(5'-phosphopyridoxyl)-d-alanine PDB code: 1l6g. |
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7. Ligand: PMH (5-hydroxy-4-{[(3-hydroxyisoxazol-4-yl)amino]methyl}-6-methylpyridin-3- yl)methyl dihydrogen phosphate PDB codes: 1xqk, 1xql. |
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8. Ligand: PP3 Alanyl-pyridoxal-5'-phosphate PDB code: 1l6f. |
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9. Ligand: SX2 4-[(5-bromopyridin-2-yl)amino]-4-oxobutanoic acid PDB code: 3cj0. |
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