Training on all systems can be requested on the facility booking system.
Please plan ahead. The microscopes are heavily booked and training may not be possible until about 1 week after your request.
Custom image analysis
I can offer customized scripts and image analysis workflows by collaboration. Please contact me if you would like to discuss this.
Published Macros available on the publications page, here...
Image processing Course
To register interest in and get advance notice of future Image processing courses please fill in the google form in this link.
|8-9th May 2019||Link to booking|
|13-14th August 2019||Booking not yet open|
The course is spread over 2 days (10am-5pm day 1, 10am-4pm day2) and offers an introduction to image analysis with the free software ImageJ / Fiji.
It is a mixture of lectures, demos, hands on sessions and exercises.
The first day is an introduction to digital images, bit depth, exposure, channels and histograms, and how to open, analyse and manipulate these in ImageJ. Exercises to get to grips with ImageJ.
The second day we will work on various exercises in image analysis, such as automatic cell counting, feature identification, cell tracking and colocalisation, with ImageJ and ICY. The afternoon session will be an introduction to macro writing. There will be a final optional session to look at your own image analysis projects, but places will be limited. Further time can be booked (free of charge) with the course organiser to look at users data.
It is advisable to bring your own laptop to work on the course exercises.
- Free for ICH imaging facility users. You must be a registered user of the facility.
- £50 - ICH / GOSH staff & students
- £75 - Non-ICH academic rate
- £100 - Corporate