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| Fragment 137 |
The PDB codes are hyperlinked to a schematic LIGPLOT diagram in PDBsum.
| Table S1.137. Fragment 137 interactions with Asp |
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Listed below are the
ligands in the PDB that contain the chemical fragment shown on the
left and which interact via this fragment with the side chain of a
Asp residue via hydrogen bonds.
The PDB codes are hyperlinked to a schematic LIGPLOT diagram in PDBsum. |
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| Ligand | |
Description | ||||||||||||||||||||||
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1. Ligand: 145 1-o-[o-nitrophenyl]-beta-d-galactopyranose PDB code: 1jyv. |
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2. Ligand: 16G N-acetyl-d-glucosamine-6-phosphate PDB codes: 1i1d, 2o28, 2vxk. |
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3. Ligand: 2G0 (2s)-1-[(2s)-6-amino-2-({[(2s,3s,4r,5s,6s)-3,4,5-trihydroxy-6-methyltetrahydro-2h-pyran-2- yl]acetyl}amino)hexanoyl]-n-[(1s)-1-carbamoyl-3-methylbutyl]pyrrolidine-2-carboxamide PDB code: 3dcq. |
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4. Ligand: ARW Methyl beta-d-arabinopyranoside PDB code: 2boj. |
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5. Ligand: ASO 1,5-anhydrosorbitol PDB code: 1xie. |
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6. Ligand: BFN 5-(acetylamino)-2,6-anhydro-3,5,9-trideoxy-3-fluoro-9-[(phenylcarbonyl)amino]-d-arabino-l-galacto- nononic acid PDB code: 3b69. |
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7. Ligand: FMF 2-deoxy-2-fluorohexopyranosyl fluoride PDB code: 1qx1. |
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8. Ligand: GDA 4-deoxy-4-amino-beta-d-glucose PDB code: 1ocb. |
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9. Ligand: GDL 2-acetamido-2-deoxy-d-glucono-1,5-lactone PDB codes: 1ur8, 1ur9. |
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10. Ligand: GL1 1-o-phosphono-alpha-d-galactopyranose PDB code: 1z4o. |
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11. Ligand: GTM O1-methyl-4-deoxy-4-thio-beta-d-glucose PDB codes: 1ocb, 1ocb. |
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12. Ligand: GUM 4-methyl-umbelliferyl-n-acetyl-chitobiose PDB code: 1bb7. |
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13. Ligand: GYU Glycosylurethan PDB code: 2uwg. |
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14. Ligand: HTG Heptyl 1-thiohexopyranoside PDB code: 2bgi. |
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15. Ligand: KDO 3-deoxy-d-manno-oct-2-ulosonic acid PDB codes: 3dur, 3dus, 3duu, 3dv4, 3dv6. |
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16. Ligand: M1P Alpha-d-mannose 1-phosphate PDB code: 2fue. |
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17. Ligand: MFU Alpha-l-methyl-fucose PDB codes: 2boi, 2jdm, 2jdp, 2jdu. |
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18. Ligand: SGC 4-deoxy-4-thio-beta-d-glucopyranose PDB codes: 1kfg, 1kfg, 1p6w, 1p6w, 1p6w, 1qjw, 1qm5, 2qno, 2qno, 2qno, 2qno, 2qno. |
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19. Ligand: SIA O-sialic acid PDB codes: 2bf6, 2h7c, 2rdg, 2z8l. |
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20. Ligand: SLB 5-n-acetyl-beta-d-neuraminic acid PDB codes: 2ber, 3b50, 3e81, 3e81. |
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21. Ligand: SSG 1,4-deoxy-1,4-dithio-beta-d-glucopyranose PDB codes: 1ocj, 1ocj. |
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22. Ligand: UCD (4s,5r,6r)-6-((2r,3r,4r,5r,6r)-3-acetamido-2,5-dihydroxy-6-(hydroxymethyl)-tetrahydro-2h-pyran-4- yloxy)-4,5-dihydroxy-5,6-dihydro-4h-pyran-2-carboxylic acid PDB code: 2ahg. |
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23. Ligand: UDC (2s,3s)-2-((2s,3r,4s,5r)-5-ethanamido-3-hydroxy-2-(hydroxymethyl)tetrahydro-2h-pyran-4-yloxy)-3,4- dihydroxy-2-methylbutanoic acid PDB code: 2z2c. |
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