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| Fragment 119 |
The PDB codes are hyperlinked to a schematic LIGPLOT diagram in PDBsum.
| Table S1.119. Fragment 119 interactions with Asp |
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Listed below are the
ligands in the PDB that contain the chemical fragment shown on the
left and which interact via this fragment with the side chain of a
Asp residue via hydrogen bonds.
The PDB codes are hyperlinked to a schematic LIGPLOT diagram in PDBsum. |
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| Ligand | |
Description | ||||||||||||||||||||||
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1. Ligand: 15A (2z,3r,4s,5r,6r)-2-[(2-aminoethyl)imino]-6-(hydroxymethyl)piperidine-3,4,5-triol PDB code: 2vqt. |
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2. Ligand: 17B (2z,3r,4s,5r,6r)-2-[(4-aminobutyl)imino]-6-(hydroxymethyl)piperidine-3,4,5-triol PDB code: 2vr4. |
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3. Ligand: DMJ 1-deoxymannojirimycin PDB code: 1hxk. |
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4. Ligand: GHR [[(3s,4s,5r,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)piperidin-2-ylidene]amino] n-(4- chlorophenyl)carbamate PDB code: 3d52. |
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5. Ligand: GOX (2s,3s,4r,5r)-6-(hydroxyamino)-2-(hydroxymethyl)-2,3,4,5-tetrahydropyridine-3,4,5-triol PDB code: 3d51. |
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6. Ligand: NBV (2r,3r,4r,5s)-1-butyl-2-(hydroxymethyl)piperidine-3,4,5-triol PDB code: 2v3d. |
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7. Ligand: NOJ 1-deoxynojirimycin PDB codes: 1i75, 2pwd. |
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8. Ligand: NOY (2r,3s,4r,5r)-5-(hydroxymethyl)piperidine-2,3,4-triol PDB code: 2vqu. |
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9. Ligand: NOZ (2s,3s,4r,5r)-5-(hydroxymethyl)piperidine-2,3,4-triol PDB code: 2vl4. |
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10. Ligand: 9MR (3r,4r,5r)-3-hydroxy-5-(hydroxymethyl)piperidin-4-yl beta-d-glucopyranoside PDB code: 2oyk. |
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11. Ligand: IFG (2r,3r,4s,5r)-2-acetamido-3,4-dihydroxy-5-hydroxymethyl-piperidine PDB code: 1jak. |
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12. Ligand: IFM 5-hydroxymethyl-3,4-dihydroxypiperidine PDB codes: 1ocn, 1up2. |
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