Teaching & Learning Portal


SysMIC: an interactive distance learning course

11 September 2013

Gerold Baier, Chris Barnes, Phil Lewis, James Smith, Nadine Mogford, Adrian Shepherd and Geraint Thomas explain the SysMIC project, which involves a consortium of universities providing a distance learning course via an online, interactive web environment.


How it works

The SysMIC (Systems training in Maths, Informatics and Computational Biology) project began because the Biotechnology and Biological Sciences Research Council (BBSRC) was finding that most of the people doing biology-related PhDs were not particularly literate in mathematics. The Council’s vision of where research funding should be going is linked to systems biology, which focuses on building mathematical models of various aspects of biology, so they were keen to help provide training so more people can work in this area and interdisciplinary research could become more widespread. You need to be more mathematically literate to understand biology in general these days; those who aren’t can find it difficult to keep up with cutting-edge research.

A call was made for bids to provide a set of distance learning courses focusing on biologists’ mathematical skills. UCL formed a consortium with the Open University, which has a long-standing commitment to distance learning, Birkbeck College, where distance learning courses in biology have been running for a number of years, and the University of Edinburgh, which has its own systems biology centre, and the bid was successful.

UCL Moodle doesn’t allow people from outside UCL to enrol, so we decided to host our own online version of the platform. Distance learning materials are significantly harder to prepare than lecture materials because when online you can’t finesse your way around errors and you can’t explain things that are unclear in the notes. For that reason, we are developing relevant interactive online tutorials and support resources. We chose to format materials in the LaTeX system, which is used extensively in mathematically oriented scientific papers as it lets you draw tables and add mathematical notation to documents, and are now developing our own interactive system which does things like revealing answers to questions, allowing students to change the parameters of graphs and so on. We plan to spend between now and November adding more features – for example, we want students to be able to log in and add their own markers containing comments. These would be shared so that, rather than students having to go separately to a forum and see whether anyone has been talking about that particular part of the text, they can expand the marker and join the conversation. It will become a much more dynamic document.

Unlike many online courses, we also offer forum support (which comes from a group of second- and third-year PhD students at UCL) and in-person meet-ups. We have funding to run 18 one-day workshops and six residential retreats around the country per year, and we’re looking into setting up video-conferencing for students who can’t physically attend. Of course, when a PhD student is working on a complicated research question, which does become a possibility during the third module, they need to consult their own tutors. However, homogenising the aspects that have been identified as being important for everyone and providing them online saves individual universities having to develop their own material.

We began work on the course in January 2012 and started running it in November with a pilot group of UCL PhD students, with Dr Chris Barnes taking responsibility for a large share of the teaching. It then became available to all of the BBSRC-funded PhD students in January 2013 as a three-module course, at six-months each, so they’re just coming up to the end of the first module now.

We’ve got a number of years in which we can refine and improve what we’ve done, but we’ve got off to a really good start and the student feedback has been positive. From a cohort of 130, we’re expecting a completion rate of around 50%, which for a free and non-compulsory e-learning course is pretty good.

At the minute, there isn’t a formal assessment because it’s a challenge to get a course like this accredited by any individual university. However, we do have various ways of gauging an individual’s engagement with the course – looking at the scores they’ve got for the online tests, forum contribution etc – and we are even planning to formally acknowledge people who have made suggestions on how the course could be improved on the website. We’ve also been given an E-Learning Development Grant to investigate the possibility of recognising students’ work using Mozilla Open Badges.

In the future we hope to be able to take SysMIC outside academia and into commercial industrial and biomedical spheres, providing training that is focused around the skills that are needed in the workplace, rather than the knowledge that universities think people ought to have!

In the shorter term, though, we’re doubling our intake in November, which is very positive for the students as they’ll have a wider support network. In terms of platform, the UCLeXtend project team are working on ways of providing UCL courses to non-UCL users, and we are planning to participate in their pilot project.

Everyone providing online courses is faced with the conundrum of how to get high recruitment, high retention and high quality all at the same time – and that’s what we plan to crack.

Interview by Ele Cooper

Further information