Mallarino, R., Bermingham, E., Willmott, K.R., Whinnett, A., & Jiggins, C.D. (2005). Molecular systematics of the butterfly genus Ithomia (Lepidoptera: Ithomiinae): a composite phylogenetic hypothesis based on seven genes. Molecular Phylogenetics & Evolution 34: 625–644. REPRINT
Joron, M. & Iwasa, Y. (2005). The evolution of a Müllerian mimic in a spatially-distributed community. Journal of Theoretical Biology 237: 87–103. REPRINT
Papanicolaou, A., Joron, M., McMillan, W.O., Blaxter, M.L. & Jiggins, C.D. (2005). Genomic tools and cDNA derived markers for butterflies. Molecular Ecology 14: 2883-2897. REPRINT
Joron, M. (2005). Polymorphic mimicry, microhabitat use, and sex-specific behaviour. Journal of Evolutionary Biology 18: 547-556. REPRINT
Mallet, J., Isaac, N.J.B. & Mace, G.M. (2005). Taxonomic inflation and divergence between species. Reply to Harris and Knapp. Trends in Ecology and Evolution 20(1): 8-9. REPRINT
Lamas, G. & Mallet, J.L.B. (2005). Case 3320. Papilio sapho Drury, 1782 (currently Heliconius sapho; Insecta, Lepidoptera): proposed conservation of the specific name. Bulletin of Zoological Nomenclature 62(1): 21-24. REPRINTMallet,
J. (2005). Hybridization as an invasion of the genome. Trends
in Ecology and Evolution 20
(5): 229-237. REPRINT;
Appendix
1; Appendix
2
Gourbiere, S. & Mallet, J. (2005). Has adaptive dynamics contributed
to the understanding of adaptive and sympatric speciation? Journal of
Evolutionary Biology 18:1201-1204.
REPRINT
Mallet, J. (2005). Speciation in the 21st Century. Review of "Speciation", by Jerry A. Coyne & H. Allen Orr. Heredity 95: 105-109. REPRINT
Whinnett, A., Brower, A.V.Z., Lee, M.-M., Willmott, K.R., & Mallet, J. (2005). Phylogenetic utility of Tektin, a novel region for inferring systematic relationships amongst Lepidoptera. Annals of the Entomological Society of America 98: 873-886. REPRINT
Whinnett, A., Willmott, K.R., Brower, A.V.Z., Simpson, F., Lamas, G. & Mallet, J. (2005). Mitochondrial DNA provides an insight into the mechanisms driving diversification in the ithomiine butterfly Hyposcada anchiala (Lepidoptera: Nymphalidae, Ithomiinae). European Journal of Entomology 102: 633-639. REPRINT
Drès, M. & Mallet, J. (2005). Molecular and behavioural evidence for gene flow between host races of the larch budmoth Zeiraphera diniana (Lepidoptera: Tortricidae). Proceedings of the Royal Society B, submitted. PREPRINT
Whinnett, A., Zimmermann, M., Willmott, K.R., Herrera, N., Mallarino, R., Simpson, F., Joron, M., Lamas, G. and Mallet, J. (2005). Strikingly variable divergence times inferred across an Amazonian butterfly 'suture zone'. Proceedings of the Royal Society B 272: 2525-2533. REPRINT
Mallet, J. (2006). What has Drosophila genetics revealed about speciation? Trends in Ecology and Evolution 21 (7): 186-193. REPRINT
Bull, V., Beltrán, M., Jiggins, C.D., McMillan, W.O., Bermingham, E. & Mallet, J. (2006). Polyphyly and gene flow between non-sibling Heliconius species. BMC Biology 4:11
Brower, A.V.Z., Freitas, A.V.L., Lee, M.-M., Silva-Brandão, K.L., Whinnett, A., Willmott, K.R. (2006). Phylogenetic relationships among the Ithomiini (Lepidoptera: Nymphalidae) inferred from one mitochondrial and two nuclear gene regions. Systematic Entomology 31: 288-301. REPRINT
Joron, M., Papa, R., Beltrán, M., Chamberlain, N., Mavárez, J., Baxter, S., Abanto, M., Bermingham, E., Humphray, S.J., Rogers, J., Beasley, H., Barlow, K., ffrench-Constant, R.H., Mallet, J., McMillan, W.O., & Jiggins, C.D. (2006). A conserved supergene locus controls colour pattern diversity in Heliconius butterflies. PLoS Biology 4(10): e303. REPRINT
Dasmahapatra, K.K. & Mallet, J. (2006). DNA barcodes: recent successes and future prospects. Heredity 97: 254 - 255. REPRINT
International Commission for Zoological Nomenclature (2006). Opinion 2152 (Case 3320). Papilio sapho, Drury, 1782 (Insecta, Lepidoptera): specific name conserved. Bulletin of Zoological Nomenclature 63: 144-145. REPRINT
Mallet, J., Beltrán, M., Neukirchen, W., & Linares, M. (2007). Natural hybridization in heliconiine butterflies: the species boundary as a continuum. BMC Evolutionary Biology 7:28. Heliconiine hybrid database
Mallet, J. (2007). Hybrid speciation. Nature 446: 279-283. REPRINT
Anstead, J.A., Mallet, J. & Denholm, I. (2007). Temporal and spatial incidence of alleles conferring knockdown resistance to pyrethroids in the peach-potato aphid, Myzus persicae (Hemiptera: Aphididae), and their association with other insecticide resistance mechanisms. Bulletin of Entomological Research 97: 243-252.
Dasmahapatra, K. K., Silva, A., Chung, J.-W., & Mallet, J. (2007). Genetic analysis of a wild-caught hybrid between non-sister Heliconius butterfly species. Biology Letters 3: 660-663. REPRINT
Elias, M., Hill, R.I., Willmott, K., Dasmahapatra, K., Brower, A.V.Z., Mallet, J., Jiggins, C.D. (2007). Limited performance of DNA barcoding in a diverse community of tropical butterflies. Proceedings of the Royal Society B 274: 2881-2889. REPRINT
Beltrán, M., Jiggins, C.D., Brower, A.V.Z., Bermingham, E., Mallet, J. (2007). Do pollen feeding and pupal-mating have a single origin in Heliconius? Inferences from multilocus sequence data. Biological Journal of the Linnean Society 92: 221-239. REPRINT
Mallet, J. (2008). Mayr's view of Darwin: was Darwin wrong about speciation? Biological Journal of the Linnean Society 95: 3–16. REPRINT
Mallet, J. (2008). Hybridization, ecological races, and the nature of species: empirical evidence for the ease of speciation. Philosophical Transactions of the Royal Society B-Biological Sciences. 363: 2971–2986. REPRINT
Dasmahapatra, K.K., Elias, M., Hill, R.I., Hoffman, J.I., & Mallet, J. (2009). Mitochondrial DNA barcoding detects some species that are real, and some that are not. Molecular Ecology Resources (in press). PREPRINT
Mallet, J., Meyer, A., Nosil, P. and Feder, J. L. (2009). Space, sympatry and speciation. Journal of Evolutionary Biology 22:2332-2341. REPRINT
Mallet, J. (2009). Shift happens! Evolution of warning colour and mimetic diversity in tropical butterflies. Ecological Entomology (in press). PREPRINT
Mallet, J. (2009). Why was Darwin's view of species rejected by mid-20th Century biologists, and how does it fare today? Biology and Philosophy (in press). PREPRINT
Mallet, J. (2009). Group selection and the development of the biological species concept. Philosophical Transactions of the Royal Society (in press). PREPRINT
Mallet, J. (2009). Alfred Russel Wallace and the Darwinian species concept: his paper on the swallowtail butterflies (Papilionidae) of 1865. Gayana (in press). PREPRINT
Sachs, J.D., Baillie, J.E.M., Sutherland, W.J., Armsworth, P.R., Ash,N., Beddington, J., Blackburn, T.M., Collen, B., Gardiner, B., Gaston, K.J., Godfray, H.C.J., Green, R.E., Harvey, P.H., House, B., Knapp, S., Kümpel, N.F., Macdonald, D.W., Mace, G.M., Mallet, J., Matthews, A., May, R.M., Petchey, O., Purvis, A., Roe, D., Safi , K., Turner, K., Walpole, M., Watson, R. & Jones, K.E. (2009). Policy forum: Biodiversity conservation and the Millennium Development Goals. Science 325: 1502-1503. LINK
Gourbière, S. & Mallet, J. (2009). Are species real? The shape of the species boundary with exponential failure, reinforcement, and the 'missing snowball.' Evolution (in press). PREPRINT
de Silva, D.L., Day, J.J., Elias, M., Willmott, K., Whinnett, A. & Mallet, J. (2009). Molecular phylogenetics of the neotropical butterfly tribe Oleriini (Nymphalidae: Ithomiinae) inferred from multiple gene sequences suggest introgressive hybridization between genera. Molecular Phylogenetics and Evolution (submitted). PREPRINT
Mallet, J., Wynne, I.R., Thomas, C.D. (2009). Introgression, species limits and conservation implications of climate change: brown argus butterflies in Britain (Polyommatus subgenus Aricia). Insect Conservation and Biodiversity (submitted). PREPRINT
Baxter, S.W., Nadeau, N., Maroja, L., Wilkinson, P., Counterman, B.A., Dawson, A., Beltrán, M., Perez-Espona, S., Chamberlain, N., Ferguson, L., Clark, R., Davidson, C., Glithero, R., Mallet, J., McMillan, W.O., Kronforst, M., Joron, M., ffrench-Constant, R. & Jiggins, C.D. (2009). Genomic hotspots for adaptation: the population genetics of Müllerian mimicry in the Heliconius melpomene clade. PLoS Genetics (accepted).
Counterman, B.A., Araujo-Perez, F., Hines, H.M., Baxter, S.W., Morrison, C.M., Lindstrom, D.P., Papa, R., Ferguson, L., Joron, M., ffrench-Constant, R., Smith, C.P., Nielsen, D.M., Chen, R., Jiggins, C.D., Reed, R.D., Halder, G., Mallet, J. & McMillan, W.O. (2009). Genomic hotspots for adaptation: the population genetics of Müllerian mimicry in Heliconius erato. PLoS Genetics (accepted).
Mallet, J. (2001). Gene flow. In: Woiwod, I.P., Reynolds, D.R. & Thomas, C.D. (eds.) Insect Movement: Mechanisms and Consequences. CAB International, Wallingford, UK. pp. 337-360. REPRINT
Jiggins, C.D., Emelianov, I. & Mallet, J. (2005). Pleiotropy promotes speciation: examples from phytophagous moths and mimetic butterflies. In: Insect Evolutionary Ecology. (eds. M. Fellowes, G. Holloway & J. Rolff). Royal Entomological Society, London: pp. 451-473. PREPRINT
Mallet, J. (2006). Species concepts. In: Evolutionary Genetics: Concepts and Case Studies (eds. Fox, C.W. & Wolf, J.B.). Oxford University Press, Oxford, pp. 367-373. REPRINT
Mallet, J. (2007). Species, concepts of. In Levin, S.A. (ed.) Encyclopedia of Biodiversity. Elsevier, Oxford. Online update, pp. 1-15. REPRINT
Mallet, J. (2007). Subspecies, semispecies, superspecies. In Levin, S.A. (ed.) Encyclopedia of Biodiversity. Elsevier, Oxford. Online update, pp. 1-5. REPRINT
Mallet, J. (2008) Wallace and the species concept of the early Darwinians. In Smith, C.R. and Beccaloni, G.W. (eds.): Natural Selection and Beyond: The Intellectual Legacy of Alfred Russell Wallace. Oxford University Press. pp. 102-113. REPRINT
Descimon, H. & Mallet, J. (2009) Bad species. In: Ecology of Butterflies in Europe (eds. Settele, J., Konvicka, M., Shreeve, T., Dennis, R. & Van Dyck, H.). Cambridge University Press. (in press). PREPRINT
Mallet, J. (2009) Introduction. In Chan, C.-L. and G. W. Beccaloni (eds) Alfred Russel Wallace (1865). "On the Phenomena of Variation and Geographical Distribution as illustrated by the Papilionidae of the Malayan Region." Reprint edition. Natural History Publications (Borneo), Kota-Kinabalu, Malaysia. PREPRINT
Mallet, J. (2009) Rapid speciation, hybridization and adaptive radiation in the Heliconius melpomene group. In Butlin, R. Bridle, J. & Schluter, D. (eds.): Speciation and Patterns of Diversity. Cambridge University Press. pp. 177-194. REPRINT