UCL School of Life and Medical Sciences

2013

• Guzman JD, Evangelopoulos D, Gupta A, Birchall K, Mwaigwisya S, Saxty B, McHugh TD, Gibbons S, Malkinson J, Bhakta S (2013). Antitubercular specific activity of ibuprofen and the other 2-arylpropanoic acids using the HT-SPOTi whole-cell phenotypic assay.. BMJ Open, 3(6), - . doi:10.1136/bmjopen-2013-002672
• Kumar K, Shorten RJ, Capocci S, Solamalai A, Goodburn A, Cropley I, McHugh TD, Lipman M (2013). The value of "inform and advise" guidance in a case of extensive tuberculosis transmission.. J Infect, 67(2), 158 - 160. doi:10.1016/j.jinf.2013.04.005
• Ling CL, McHugh TD (2013). Rapid detection of atypical respiratory bacterial pathogens by real-time PCR.. Methods Mol Biol, 943, 125 - 133. doi:10.1007/978-1-60327-353-4_8
• Shorten RJ, McGregor AC, Platt S, Jenkins C, Lipman MC, Gillespie SH, Charalambous BM, McHugh TD (2013). When is an outbreak not an outbreak? Fit, divergent strains of Mycobacterium tuberculosis display independent evolution of drug resistance in a large London outbreak.. J Antimicrob Chemother, 68(3), 543 - 549. doi:10.1093/jac/dks430
• Moganeradj K, Abubakar I, McHugh TD, Sonnenberg P, Arnold C (2013). Insertion site mapping for repeated elements in Mycobacterium tuberculosis.. J Microbiol Methods, 92(2), 192 - 196. doi:10.1016/j.mimet.2012.12.005
• Lawn SD, Mwaba P, Bates M, Piatek A, Alexander H, Marais BJ, Cuevas LE, McHugh TD, Zijenah L, Kapata N, Abubakar I, McNerney R, Hoelscher M, Memish ZA, Migliori GB, Kim P, Maeurer M, Schito M, Zumla A (2013). Advances in tuberculosis diagnostics: the Xpert MTB/RIF assay and future prospects for a point-of-care test.. Lancet Infect Dis, 13(4), 349 - 361. doi:10.1016/S1473-3099(13)70008-2
• Abubakar I, Zignol M, Falzon D, Raviglione M, Ditiu L, Masham S, Adetifa I, Ford N, Cox H, Lawn SD, Marais BJ, McHugh TD, Mwaba P, Bates M, Lipman M, Zijenah L, Logan S, McNerney R, Zumla A, Sarda K, Nahid P, Hoelscher M, Pletschette M, Memish ZA, Kim P, Hafner R, Cole S, Migliori GB, Maeurer M, Schito M, Zumla A (2013). Drug-resistant tuberculosis: time for visionary political leadership.. Lancet Infect Dis, 13(6), 529 - 539. doi:10.1016/S1473-3099(13)70030-6

2012

• Osman K, Evangelopoulos D, Basavannacharya C, Gupta A, McHugh TD, Bhakta S, Gibbons S (2012). An antibacterial from Hypericum acmosepalum inhibits ATP-dependent MurE ligase from Mycobacterium tuberculosis.. Int J Antimicrob Agents, 39(2), 124 - 129. doi:10.1016/j.ijantimicag.2011.09.018
• Markarian SA, Evangelopoulos D, Harutyunyan LR, Pepoyan EK, Guzman JD, McHugh TD, Bhakta S (2012). The Properties of Solutions of Isoniazid in Water and Dimethylsulfoxide. JOURNAL OF SOLUTION CHEMISTRY, 41(9), 1462 - 1476. doi:10.1007/s10953-012-9883-7
• (2012). Tuberculosis: Diagnosis and Treatment.
• Garcha DS, Thurston SJ, Patel AR, Mackay AJ, Goldring JJ, Donaldson GC, McHugh TD, Wedzicha JA (2012). Changes in prevalence and load of airway bacteria using quantitative PCR in stable and exacerbated COPD.. Thorax, 67(12), 1075 - 1080. doi:10.1136/thoraxjnl-2012-201924
• Kottakota SK, Evangelopoulos D, Alnimr A, Bhakta S, McHugh TD, Gray M, Groundwater PW, Marrs EC, Perry JD, Spilling CD, Harburn JJ (2012). Synthesis and biological evaluation of purpurealidin E-derived marine sponge metabolites: aplysamine-2, aplyzanzine A, and suberedamines A and B.. J Nat Prod, 75(6), 1090 - 1101. doi:10.1021/np300102z
• Coxon GD, Cooper CB, Gillespie SH, McHugh TD (2012). Strategies and challenges involved in the discovery of new chemical entities during early-stage tuberculosis drug discovery.. J Infect Dis, 205 Suppl 2, S258 - S264. doi:10.1093/infdis/jis191
• Kottakota SK, Benton M, Evangelopoulos D, Guzman JD, Bhakta S, McHugh TD, Gray M, Groundwater PW, Marrs EC, Perry JD, Harburn JJ (2012). Versatile routes to marine sponge metabolites through benzylidene rhodanines.. Org Lett, 14(24), 6310 - 6313. doi:10.1021/ol303057a
• Jenkins C, Ling CL, Ciesielczuk HL, Lockwood J, Hopkins S, McHugh TD, Gillespie SH, Kibbler CC (2012). Detection and identification of bacteria in clinical samples by 16S rRNA gene sequencing: comparison of two different approaches in clinical practice.. J Med Microbiol, 61(Pt 4), 483 - 488. doi:10.1099/jmm.0.030387-0
• Thurston SJ, McHugh TD, Donaldson GC, Wedzicha JA (2012). PROFILE OF THE AIRWAY MICROBIOME IN COPD USING MALDI-TOF. doi:10.1136/thoraxjnl-2012-202678.030
• Zumla A, Abubakar I, Raviglione M, Hoelscher M, Ditiu L, McHugh TD, Squire SB, Cox H, Ford N, McNerney R, Marais B, Grobusch M, Lawn SD, Migliori GB, Mwaba P, O'Grady J, Pletschette M, Ramsay A, Chakaya J, Schito M, Swaminathan S, Memish Z, Maeurer M, Atun R (2012). Drug-resistant tuberculosis--current dilemmas, unanswered questions, challenges, and priority needs.. J Infect Dis, 205 Suppl 2, S228 - S240. doi:10.1093/infdis/jir858
• McNerney R, Maeurer M, Abubakar I, Marais B, McHugh TD, Ford N, Weyer K, Lawn S, Grobusch MP, Memish Z, Squire SB, Pantaleo G, Chakaya J, Casenghi M, Migliori GB, Mwaba P, Zijenah L, Hoelscher M, Cox H, Swaminathan S, Kim PS, Schito M, Harari A, Bates M, Schwank S, O'Grady J, Pletschette M, Ditui L, Atun R, Zumla A (2012). Tuberculosis diagnostics and biomarkers: needs, challenges, recent advances, and opportunities.. J Infect Dis, 205 Suppl 2, S147 - S158. doi:10.1093/infdis/jir860
• Phillips PP, Gillespie SH, Boeree M, Heinrich N, Aarnoutse R, McHugh T, Pletschette M, Lienhardt C, Hafner R, Mgone C, Zumla A, Nunn AJ, Hoelscher M (2012). Innovative trial designs are practical solutions for improving the treatment of tuberculosis.. J Infect Dis, 205 Suppl 2, S250 - S257. doi:10.1093/infdis/jis041

2011

• James C, Wey E, McHugh T, James E (2011). MICROBES: SHAPE, COLOUR AND PATTERN - A COMMUNITY ART PROJECT USING FAMILY LEARNING TO PROMOTE UNDERSTANDING OF BIOMEDICAL SCIENCECATEGORY: LESSON IN MICROBIOLOGY & INFECTION CONTROL. JOURNAL OF INFECTION, 63(6), E71 - E71.
• Ling C, Malloy A, Hopkins S, Ciesielczuk H, Lockwood J, McHugh T, Gillespie S (2011). IMPROVING THE DIAGNOSIS OF BACTERIAL RESPIRATORY TRACT INFECTIONS. JOURNAL OF INFECTION, 63(6), 490 - 491.
• Thurston SJ, Donaldson GC, McHugh TD, Wedzicha JA (2011). IMPACT OF COPD SEVERITY AND SPUTUM PRODUCTION ON ANTIBIOTIC RESISTANCE. doi:10.1136/thoraxjnl-2011-201054b.17
• Garcha DS, Thurston SJ, Patel ARC, Mackay AJ, Goldring JJP, McHugh TD, Donaldson GC, Wedzicha JA (2011). A COMPARISON OF PREVALENCE AND LOAD OF AIRWAY BACTERIA IN COPD PATIENTS WITH PAIRED STABLE AND EXACERBATION STATE SAMPLES. doi:10.1136/thoraxjnl-2011-201054b.18
• Gorton RL, Stone NARH, Ramnarain P, Barker K, Mchugh TD, Kibbler CC (2011). A comparison of three rapid identification techniques for the identification of yeasts from positive blood cultures: Gram's stain, PNA-FISH and MALDI-TOF. MYCOSES, 54, 78 - 78.
• Guzman JD, Wube A, Evangelopoulos D, Gupta A, Hüfner A, Basavannacharya C, Rahman MM, Thomaschitz C, Bauer R, McHugh TD, Nobeli I, Prieto JM, Gibbons S, Bucar F, Bhakta S (2011). Interaction of N-methyl-2-alkenyl-4-quinolones with ATP-dependent MurE ligase of Mycobacterium tuberculosis: antibacterial activity, molecular docking and inhibition kinetics.. J Antimicrob Chemother, 66(8), 1766 - 1772. doi:10.1093/jac/dkr203
• Satta G, Ling C, McHugh TD, Hopkins S (2011). UTILITY OF SPA TYPING IN UNDERSTANDING EPIDEMIOLOGY OF STAPHYLOCOCCUS AUREUS BACTERAEMIA ISOLATES IN A SINGLE UNIVERSITY HOSPITALCATEGORY: SCIENTIFIC FREE PAPER. JOURNAL OF INFECTION, 63(6), E51 - E52.
• Honeyborne I, McHugh TD, Phillips PP, Bannoo S, Bateson A, Carroll N, Perrin FM, Ronacher K, Wright L, van Helden PD, Walzl G, Gillespie SH (2011). Molecular bacterial load assay, a culture-free biomarker for rapid and accurate quantification of sputum Mycobacterium tuberculosis bacillary load during treatment.. J Clin Microbiol, 49(11), 3905 - 3911. doi:10.1128/JCM.00547-11

2010

• Perrin FM, Woodward N, Phillips PP, McHugh TD, Nunn AJ, Lipman MC, Gillespie SH (2010). Radiological cavitation, sputum mycobacterial load and treatment response in pulmonary tuberculosis.. Int J Tuberc Lung Dis, 14(12), 1596 - 1602.
• Pope CF, Gillespie SH, Moore JE, McHugh TD (2010). Approaches to measure the fitness of Burkholderia cepacia complex isolates.. J Med Microbiol, 59(Pt 6), 679 - 686. doi:10.1099/jmm.0.017830-0
• (2010). Antibiotic Resistance Protocols, Second edition.
• Breathnach A, McHugh TD, Butcher PD (2010). Prevalence and clinical correlations of genetic subtypes of Giardia lamblia in an urban setting. Epidemiology and Infection, 138(10), 1459 - 1467. doi:10.1017/S0950268810000208
• O'Sullivan DM, McHugh TD, Gillespie SH (2010). Mapping the fitness of Mycobacterium tuberculosis strains: a complex picture.. J Med Microbiol, 59(Pt 12), 1533 - 1535. doi:10.1099/jmm.0.019091-0
• Pope CF, McHugh TD, Gillespie SH (2010). Methods to determine fitness in bacteria.. Methods Mol Biol, 642, 113 - 121. doi:10.1007/978-1-60327-279-7_9
• Garcha DS, Thurston SJ, Patel ARC, Goldring JJP, McHugh TD, Donaldson GC, Wedzicha JA (2010). QUANTITATIVE PCR-BASED DETECTION AND QUANTIFICATION OF ATYPICAL BACTERIA AT BASELINE AND EXACERBATION OF COPD. doi:10.1136/thx.2010.150987.11

2009

• Jenkins C, Bacon J, Allnutt J, Hatch KA, Bose A, O Sullivan DM, Arnold C, Gillespie SH, McHugh TD (2009). Enhanced heterogeneity of rpoB in Mycobacterium tuberculosis found at low pH. Journal of Antimicrobial Chemotherapy, , - .
• Al-Balas Q, Anthony NG, Al-Jaidi1 B, Alnmir A, Abbott G, Brown AK, Taylor RC, Besra GS, McHugh TD, Gillespie SH, Johnston BF, Mackay SP, Coxon GD (2009). Identification of 2-Aminothiazole-4-Carboxylate Derivatives Active against Mycobacterium tuberculosis H37Rv and the b-Ketoacyl-ACP Synthase mtFabH. PLoS ONE, 4(5), e5617 - .
• Naqvi SM, Jenkins C, McHugh TD, Balakrishnan I (2009). Identification of the qnr family in Enterobacteriaceae in clinical practice.. Journal of Antimicrobial Chemotherapy, 63(4), 830 - 832.
• McHugh TD (2009). How to Look Sensible When Requesting a Molecular Microbiological Diagnosis. Bugs & Drugs, 13(2), - .
• McHugh TD (2009). Molecular diagnosis of antibiotic resistance.
• Pope CF, O'Sullivan DM, McHugh TD, Gillespie SH (2009). A Practical Guide to Measuring Mutation Rates in Antibiotic Resistance (vol 52, pg 1209, 2008). ANTIMICROB AGENTS CH, 53(1), 339 - 339. doi:10.1128/AAC.01441-08
• Perrin FM, Breen RA, McHugh TD, Gillespie SH, Lipman MC (2009). Are patients on treatment for pulmonary TB who stop expectorating sputum genuinely culture negative?. Thorax, 64(11), 1009 - 1010.

2008

• Pope CF, O'Sullivan DM, McHugh TD, Gillespie SH (2008). A practical guide to measuring mutation rates in antibiotic resistance. ANTIMICROB AGENTS CH, 52(4), 1209 - 1214. doi:10.1128/AAC.01152-07
• Pope CF, O Sullivan DM, McHugh TD, Gillespie SH (2008). Measuring Mutation Rates in Antibiotic Resistance: A Practical Guide. Antimicrobial Agents and Chemotherapy, 52(4), 1209 - 1214.
• O'Sullivan DM, McHugh TD, Gillespie SH (2008). The effect of oxidative stress on the mutation rate of Mycobacterium tuberculosis with impaired catalase/peroxidase function.. Journal of Antimicrobial Chemotherapy, , - .
• O'Sullivan DM, Hinds J, Butcher PD, Gillespie SH, McHugh TD (2008). Mycobacterium tuberculosis DNA repair in response to subinhibitory concentrations of ciprofloxacin. Journal of Antimicrobial Chemotherapy, , - .
• Davies AP, Dhillon AP, Young M, Henderson B, McHugh TD, Gillespie SH (2008). Resuscitation-promoting factors are expressed in Mycobacterium tuberculosis-infected human tissue. Tuberculosis, 88(5), 462 - 468.
• Pope CF, Gillespie SH, Pratten J, McHugh TD (2008). Fluoroquinolone-resistant mutants of Burkholderia cepacia. Antimicrobial Agents and Chemotherapy, 52(3), 1201 - 1203.
• Breen RA, Barry SM, Smith CJ, Shorten RJ, Dilworth JP, Cropley I, McHugh TD, Gillespie SH, Janossy G, Lipman MC (2008). The Clinical Application of a Rapid Lung-Orientated TB Immunoassay in Individuals with Possible Tuberculosis.. Thorax, 63(1), 67 - 71.
• Perrin FMR, Breen RAM, McHugh TD, Gillespie SH, Lipman MCI (2008). IF PATIENTS WITH PULMONARY TUBERCULOSIS ON TREATMENT STOP EXPECTORATING SPUTUM, ARE THEY GENUINELY CULTURE NEGATIVE?.

2007

• O'Sullivan DM, Sander C, Shorten RJ, Gillespie SH, Hill AV, McHugh TD, McShane H, Tchilian EZ (2007). Evaluation of liquid culture for quantitation of Mycobacterium tuberculosis in murine models.. Vaccine, 25(49), 8203 - 8205.
• Breen RAM, Dunleavy A, Perrin F, Mchugh TD, Gillespie S, Cropley I, Lipman MCI (2007). Rapid immuno-diagnosis active extrapulmonary tuberculosis.
• Perrin FMR, Lipman MCI, McHugh TD, Gillespie SH (2007). Biomarkers of treatment response in clinical trials of novel anti-TB agents. The Lancet Infectious Diseases, 7, 481 - 490.
• Williams KJ, Ling CL, Jenkins C, Gillespie SH, McHugh TD (2007). A paradigm for the molecular identification of Mycobacterium species in a routine diagnostic laboratory. Journal of Medical Microbiology, 56(part 5), 598 - 602.
• Perrin FM, Lipman MC, McHugh TD, Gillespie SH (2007). Biomarkers of treatment response in clinical trials of novel antituberculosis agents.. Lancet Infect Dis, 7(7), 481 - 490.
• Pope CF, McHugh TD, Pratten J, Gillespie SH (2007). Measuring bacterial fitness.

2006

• Uriyo J, Gosling RD, Maddox V, Sam NE, Schimana W, Gillespie SH, McHugh TD (2006). Prevalences of Pneumocystis jiroveci, Mycobacterium tuberculosis and Streptococcus pneumoniae infection in children with severe pneumonia, in a tertiary referral hospital in northern Tanzania.. Annals of Tropical Medicine and Parasitology, 100(3), 245 - 249.
• Cullen MM, Sam NE, Kanduma EG, McHugh TD, Gillespie SH (2006). Direct detection of heteroresistance in Mycobacterium tuberculosis using molecular techniques.. Journal of Medical Microbiology, 55(8), 1157 - 1158.
• Paterson PJ, Seaton S, McHugh TD, McLaughlin J, Potter M, Prentice HG, Kibbler CC (2006). Validation and clinical application of molecular methods for the identification of molds in tissue.. Clin Infect Dis, 42(1), 51 - 56. doi:10.1086/498111
• Creer DD, Dilworth JP, Gillespie SH, Johnston AR, Johnston SL, Ling C, Patel S, Sanderson G, Wallace PG, McHugh TD (2006). Aetiological role of viral and bacterial infections in acute adult lower respiratory tract infection (LRTI) in primary care. Thorax, 61(1), 75 - 79. doi:10.1136/thx.2004.027441
• McHugh TD, Pope CF (2006). Strand displacement amplification. In Jurgen Fuchs MP (Ed.), Encyclopedia of Medical Genomics and Proteomics (pp. - ). : Taylor Francis.
• Paterson PJ, Seaton S, McHugh TD, McLaughlin J, Potter M, Prentice HG, Kibbler CC (2006). Validation and clinical application of molecular methods for the identification of molds in tissue. Clinical Infectious Diseases, 42(1), 51 - 56.

2005

• Perrin FM, Breen RA, Lipman MC, Shorten RJ, Gillespie SH, McHugh TD (2005). Is there a relationship between Mycobacterium tuberculosis strain type and TB paradoxical reaction?. Thorax, 60(8), 706 - 707. doi:10.1136/thx.2005.044321
• Gillespie SH, Basu S, Dickens AL, O'Sullivan DM, McHugh TD (2005). Effect of subinhibitory concentrations of ciprofloxacin on Mycobacterium fortuitum mutation rates. Journal of Antimicrobial Chemotherapy, 56(2), 344 - 348. doi:10.1093/jac/dki191
• Jenkins C, Claxton AP, Shorten RJ, McHugh TD, Gillespie SH (2005). Rifampicin resistance in tuberculosis outbreak, London, England.. Emerging Infectious Diseases, 11(6), 931 - 934.
• Paterson PJ, Seaton S, Yeghen T, McHugh TD, McLaughlin J, Hoffbrand AV, Kibbler CC (2005). Molecular confirmation of invasive infection caused byChaetomium globosum. Journal of Clinical Pathology, 58(3), 334 - 334.
• Gillespie SH, Gosling RD, Uiso L, Sam NE, Kanduma EG, McHugh TD (2005). Early bactericidal activity of a moxifloxacin and isoniazid combination in smear-positive pulmonary tuberculosis. Journal of Antimicrobial Chemotherapy, 56(6), 1169 - 1171.
• Shorten RJ, Gillespie SH, Sule O, Lipman M, McHugh TD (2005). Molecular strain typing of M. tuberculosis isolates from a suspected outbreak involving a faulty bronchoscope. Journal of Hospital Infection, 61(1), 86 - 87. doi:10.1016/jhin.2004.12.013
• O'Sullivan DM, McHugh TD, Gillespie SH (2005). Analysis of rpoB and pncA mutations in the published literature:an insight into the role of oxidative stress inMycobacterium tuberculosis evolution?. Journal of Antimicrobial Chemotherapy, 55(5), 674 - 679.
• Shorten RJ, Gillespie SH, Sule O, Lipman M, McHugh TD (2005). Molecular strain typing of M. tuberculosis isolates from a suspected outbreak involving a faulty bronchoscope. J HOSP INFECT, 61(1), 86 - 87. doi:10.1016/j.jhin.2004.12.013
• Batt SL, Charalambous BM, McHugh TD, Martin S, Gillespie SH (2005). Novel PCR-restriction fragement length polymorphism method to determine serotypes or serogroups of Streptococcus pneumoniae isolates. Journal of Clinical Microbiology, 43(6), 2656 - 2661. doi:10.1128/JCM.43.6.2656-2661.2005
• McHugh TD, Batt SL, Shorten RJ, Gosling RD, Uiso L, Gillespie SH (2005). Mycobacterium tuberculosis lineage: a naming of the parts.. Tuberculosis, 85(3), 127 - 136. doi:10.1016/j.tube.2004.06.002
• Paterson PJ, Seaton S, Yeghen T, McHugh TD, McLaughlin J, Hoffbrand AV, Kibbler CC (2005). Molecular confirmation of invasive infection caused by Chaetomium globosum.. J Clin Pathol, 58(3), 334 - .
• Dale JW, Bothamley GH, Drobniewski F, Gillespie SH, McHugh TD, Pitman R (2005). Origins and properties of Mycobacteriumtuberculosis isolates in London. Journal of Medical Microbiology, 54(6), 575 - 582.
• Perrin FMR, Parsons YN, Breen RAM, Islam J, McHugh TD, Lipman MCI, Gillespie SH (2005). Messenger RNA as a marker of treatment response in pulmonary tuberculosis.

2004

• McHugh TD, Pope CF, Ling CL, Patel P, Billington OJ, Gosling RD, Lipman MC, Gillespie SH (2004). Prospective evaluation of BDProbeTec strand displacement amplification (SDA) system for diagnosis of tuberculosis in non-respiratory and respiratory samples. Journal of Medical Microbiology, 53(12), 1215 - 1219. doi:10.1099/jmm.0.45780-0
• Charalambous BM, McHugh TD (2004). Immunological principles of vaccination (Theory). In Jong EC, Zuckerman JD (Ed.), Travelers' Vaccines. Section 1: Vaccine Immunology (pp. 1 - 19). : BC Decker Inc.
• Perrin FMR, Shorten RJ, Breen RAM, McHugh TD, Lipman MCI (2004). Is there an association between paradoxical reactions and mycobacterium tuberculosis strain type?.

2003

• Kanduma E, McHugh TD, Gillespie SH (2003). Molecular methods for Mycobacterium tuberculosis strain typing: a users guide. Journal of Applied Microbiology, 94(5), 781 - 791.
• Gillespie SH, McHugh TD (2003). Criteria for identification of cross-contamination of cultures of Mycobacterium tuberculosis in routine microbiology laboratories - Authors' reply (reference 4). J CLIN MICROBIOL, 41(5), 2269 - 2270.
• Huggett JF, McHugh TD, Zumla A (2003). Tuberculosis: amplification-based clinical diagnostic techniques. The International Journal of Biochemistry and Cell Biology, 35(10), 1407 - 1412.
• Maguire H, Dale JW, McHugh TD, Butcher PD, Gillespie SH, Costetsos A, Al-Ghusein H, Holland R, Dickens A, Marston L, Wilson P, Pitman R, Strachan D, Drobniewski FA, Banerjee DK (2003). Molecular epidemiology of tuberculosis in London 1995-7 showing low rate of active transmission. J CLIN PATHOL-MOL PA, 56(2), 121 - 126.
• Gillespie SH, McHugh TD (2003). Criteria for identification of cross-contamination of cultures of Mycobacterium tuberculosis in routine microbiology laboratories (letter). Journal of Clinical Microbiology, 41(5), 2269 - 2270.
• Dale JW, Al Ghusein H, Butcher P, Dickens A, Drobniewski F, Forbes KJ, Gillespie SH, Lamprecht D, McHugh TD, Pitman R, Rastogi N, Smith AT, Sola C, Yesilkaya H (2003). Evolutionary relationships among strains of Mycobacterium tuberculosis with few copies of IS6110. Journal of Applied Microbiology, 185, 2555 - 2562.

2002

• Gillespie SH, Billington OJ, Breathnach A, McHugh TD (2002). Multiple drug resistant tuberculosis: evidence for changing fitness on passage through human hosts. Microbial Drug Resistance, 8, 1 - 7.
• Maguire H, Dale JW, McHugh TD, Butcher PD, Gillespie SH, Costetsos A, Al Ghusein H, Holland R, Dickens A, Marston L, Wilson P, Pitman R, Strachan D, Drobniewski FA, Banerjee DK (2002). Molecular epidemiology of tuberculosis in London 1995-7 showing low rate of active transmission. THORAX, 57(7), 617 - 622.
• Gillespie SH, Billington OJ, Breathnach A, McHugh TD (2002). Multiple drug-resistant Mycobacterium tuberculosis: evidence for changing fitness following passage through human hosts.. Microb Drug Resist, 8(4), 273 - 279. doi:10.1089/10766290260469534
• Ruddy M, McHugh TD, Dale JW, Banerjee D, Maguire H, Wilson P, Drobniewski F, Butcher P, Gillespie SH (2002). Examination of the rate of unrecognized cross-contamination with Mycobacterium tuberculosis in London microbiology laboratories. Journal of Clinical Microbiology, 40(11), 4100 - 4104.
• Melzer M, Brown TJ, French GL, Dickens A, McHugh TD, Bagg LR, Storring RA, Lacey S (2002). Molecular analysis of drug resistant TB. THORAX, 57(6), 562 - 563.

2000

• Davies AP, Billington OJ, Bannister BA, Weir WRC, McHugh TD, Gillespie SH (2000). Comparison of fitness of two isolates of Mycobacterium tuberculosis, one of which had developed mulit-drug resistance during the course of treatment. Journal of Infection, 41(2), 184 - 187.
• Gillespie SH, Dickens A, McHugh TD (2000). False molecular clusters due to non-random association of IS6110 with Mycobacterium tuberculosis. Journal of Clinical Microbiology, 38(6), 2081 - 2086.
• Creer DD, McHugh TD, Laqueur S, Wallace PG, Dilworth JP (2000). The relationship of antibiotics in acute adult lower respiratory tract infection (LRTI) to clinical presentation and outcome. THORAX, 55, A71 - A71.
• Davies AP, Billington OJ, McHugh TD, Mitchison DA, Gillespie SH (2000). Comparison of phenotypic and genotypic methods for pyrazinamide susceptibility testing with Mycobacterium tuberculosis. Journal of Clinical Microbiology, 38(10), 3686 - 3688.
• McHugh TD (2000). Application of SSCP to identification of resistance mutations. In Gillespie SH (Ed.), Antibiotic Resistance Methods and Protocols (pp. - ). : The Humana Press Inc.

1999

• Billington OJ, McHugh TD, Gillespie SH (1999). Physiological cost of rifampin resistance induced in vitro in Mycobacterium tuberculosis.. Antimicrobial Agents and Chemotherapy, 43(8), 1866 - 1869.

1998

• Gillespie SH, Newport LE, McHugh TD (1998). IS6110 homologs are present in multiple copies in mycobacteria other than tuberculosis-causing mycobacteria - Authors' reply. J CLIN MICROBIOL, 36(3), 854 - 854.
• McHugh TD, Gillespie SH (1998). Nonrandom association of IS6110 and Mycobacterium tuberculosis: implications for molecular epidemiological studies.. Journal of Clinical Microbiology, 36(5), 1410 - 1413.

1997

• McHugh TD, Bathgate T, Mangan J, Johnson JD, Holliman RE, Butcher PD (1997). Recognition of tissue cyst-specific antigens in reactivating toxoplasmosis.. Journal of Medical Microbiology, 46(7), 587 - 595.
• Gillespie SH, McHugh TD (1997). The genus mycobacteria. In Emmerson AM, Hawkey PM, Gillespie SH (Ed.), Principles and practice of Clinical Bacteriology (pp. - ). : John Wiley.
• Gillespie SH, McHugh TD, Ayres H, Dickens A, Efstratiou A, Whiting GC (1997). Allelic variation in Streptococcus pneumoniae autolysin (N-acetyl muramoyl-L-alanine amidase).. Infection and Immunity, 65(9), 3936 - 3938.
• Gillespie SH, McHugh TD (1997). Monitoring the therapy of pulmonary tuberculosis by nested polymerase chain reaction.. Journal of Infection, 35(5), 324 - 325.
• Gillespie SH, McHugh TD, Hughes JE, Dickens A, Kyi MS, Kelsey M (1997). An outbreak of penicillin resistant Streptococcus pneumoniae investigated by a polymerase chain reaction based genotyping method.. Journal of Clinical Pathology, 50(10), 847 - 851.
• Gillespie SH, McHugh TD, Newport LE (1997). Specificity of IS6110-based amplification assays for Mycobacterium tuberculosis complex.. Journal of Clinical Microbiology, 35(3), 799 - 801.
• McHugh TD, Newport LE, Gillespie SH (1997). IS6110 homologs are present in multiple copies in mycobacteria other than tuberculosis-causing mycobacteria.. Journal of Clinical Microbiology, 35(7), 1769 - 1771.
• Gillespie SH, McHugh TD (1997). The biological cost of antimicrobial resistance.. Trends in Microbiology, 5(9), 337 - 339.

1995

• KENT L, MCHUGH TD, BILLINGTON O, DALE JW, GILLESPIE SH (1995). DEMONSTRATION OF HOMOLOGY BETWEEN IS6110 OF MYCOBACTERIUM-TUBERCULOSIS AND DNAS OF OTHER MYCOBACTERIUM SPP (VOL 33, PG 2290, 1995). J CLIN MICROBIOL, 33(11), 3082 - 3082.
• Kent L, McHugh TD, Billington O, Dale JW, Gillespie SH (1995). Demonstration of homology between IS6110 of Mycobacterium tuberculosis and DNAs of other Mycobacterium spp.?. Journal of Clinical Microbiology, 33(9), 2290 - 2293.
• McHugh TD, Ramsay AR, James EA, Mognie R, Gillespie SH (1995). Pitfalls of PCR: misdiagnosis of cerebral nocardia infection.. The Lancet, 346, 1436 - .

1994

• McHugh TD, Jenkins T, Greenwood R, McLaren DJ (1994). The migration and attrition of Strongyloides ratti in naive and sensitized rats. Journal of Helminthology, 68(2), 143 - 148.
• McHugh TD, Holliman RE, Butcher PD (1994). The in vitro model of tissue cyst formation in Toxoplasma gondii.. Parasitology Today, 10(7), 281 - 285.

1993

• McHugh TD, Gbewonyo A, Johnson JD, Holliman RE, Butcher PD (1993). Development of an in vitro model of Toxoplasma gondii cyst formation.. FEMS Microbiology Letters, 114(3), 325 - 332.

1991

• CEVALLOS AM, MCHUGH TD, CARNABY S, FARTHING MJG (1991). PHENOTYPIC AND GENOTYPIC VARIATION IN GIARDIA-LAMBLIA. SAUDI MED J, 12(4), 285 - 289.
• KATELARIS PH, MCHUGH TD, CARNABY S, CEVALLOS AM, CHAR S, FARTHING MJG (1991). BILE MODULATES GENOTYPIC AND PHENOTYPIC CHARACTERISTICS OF GIARDIA-LAMBLIA. GUT, 32(10), A1260 - A1260.
• CARNABY S, MCHUGH TD, FARTHING MJG (1991). DNA FINGERPRINTING OF GIARDIA-LAMBLIA WITH THE M13 BACTERIOPHAGE GENOME. GUT, 32(5), A596 - A597.
• CARNABY S, MCHUGH TD, KATELARIS PH, FARTHING MJG (1991). GENOMIC EVIDENCE FOR MULTIPLE STRAIN INVOLVEMENT IN GIARDIA-LAMBLIA INFECTION. GUT, 32(5), A563 - A563.

1990

• FARTHING MJG, BUTCHER PD, CEVALLOS AM, MORRISON AM, MCHUGH TD (1990). PHENOTYPIC AND GENOTYPIC VARIATION IN GIARDIA-LAMBLIA. PEDIATR RES, 27(5), 537 - 537.
• MORRISON AM, MCHUGH TD, BUTCHER PD, CEVALLOS AM, FARTHING MJG (1990). HEAT-SHOCK PROTEINS IN HUMAN AND ANIMAL GIARDIA LAMBLIA ISOLATES. CLIN SCI, 78(4), P38 - P38.
• MCHUGH TD, YAMSON PP, FARTHING MJG (1990). GIARDIA LAMBLIA - TEMPORAL ANALYSIS OF ANTIGEN RECOGNITION. GUT, 31(5), A610 - A610.

1989

• McHugh TD, Jenkins T, McLaren DJ (1989). Strongyloides ratti: studies of cutaneous reactions elicited in naive and sensitized rats and of changes in surface antigenicity of skin-penetrating larvae.. Parasitology, 98(1), 95 - 103.

• Pope CF, Gillespie SH, Moore JE, McHugh TD (). Evolution of antibiotic resistance in Burkholderia cepacia complex bacteria isolated from cystic fibrosis patients.. Journal of Medical Microbiology, , - .
• Charalambous BM, McHugh TD (). Immunological principles of vaccination (Theory). In Jong EC, Zuckerman JD (Ed.), Travelers' Vaccines. (pp. - ). : BC Decker Inc.
• Perrin FMR, Breen RAM, McHugh TD, Gillespie SH, Lipman MCI (). Are patients on treatment for pulmonary TB who stop expectorating sputum genuinely culture negative?. Thorax, , - .